The Childhood Cancer Data Lab (Data Lab) develops tools and training programs to empower childhood cancer researchers to utilize data to make more robust discoveries.
The Childhood Cancer Data Lab is an initiative of Alex’s Lemonade Stand Foundation.
2023 June Introduction to Single-cell RNA-Seq Workshop
Dates: 2023-06-13 through 2023-06-15
Getting Started
Pre-workshop Prep
- Please review the Code of Conduct.
- If you are new to using R, we’ve assembled some resources for getting starting with R that can optionally help prepare you for the workshop.
- Sign up for the Cancer Data Science Slack workspace at http://ccdatalab.org/slack. Please use your full name in your profile, so we can find you easily and add you to the private meeting channel.
- Once you have been given your username and temporary password, follow these instructions to log in to our RStudio server and change your password.
- Please take a look at our Slack procedures to familiarize yourself with how we will be using this platform throughout training.
Schedule
For more details on the schedule for each day, click here.
Workshop Structure
Please also refer to the schedule for information about timing and links relevant to each day. An overview of the modules we will cover and associated links can be found on the Workshop Materials document.
During instruction sessions, Data Lab staff will lead you through course material using RStudio Server.
During consultation sessions, Data Lab staff will be available to answer questions and provide 1:1 assistance as you work through exercise notebooks we provide or work with your own transcriptomic data. We’ll use Zoom and Slack for these days, too.
We recommend you follow these guidelines for posting errors so you can maximize others’ abilities to help you resolve your error.