Back to refine.bio pyrefinebio
  • Quickstart
    • Installation
    • Setting up Tokens
    • Downloading Datasets
    • Downloading Compendia
    • Getting Help
    • Getting Started with the CLI
    • Interacting with the API
    • Advanced Dataset Usage
    • Advanced Token Usage
  • Using the CLI
    • Setting up Tokens
    • Downloading Datasets
    • Downloading Compendia
    • Getting Information About pyrefinebio Classes and Functions
  • Classes
    • Compendium
    • Computational Result
    • Computed File
    • Dataset
    • Experiment
    • Institution
    • Organism
    • Original File
    • Platform
    • Downloader Job
    • Processor Job
    • Survey Job
    • Processor
    • QN Target
    • Sample
    • Token
    • Transcriptome Index
  • More Stuff
    • High Level Functions
    • Paginated List
    • Config
pyrefinebio
  • Docs »
  • Welcome to pyrefinebio!
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Welcome to pyrefinebio!¶

pyrefinebio is a python client for the refine.bio API.

You can use it to create and download Datasets, download Compendia, and to interact with the refine.bio API.

pyrefinebio can be installed through PyPI:

$ pip install pyrefinebio

Documentation¶

  • Quickstart
    • Installation
    • Setting up Tokens
    • Downloading Datasets
    • Downloading Compendia
    • Getting Help
    • Getting Started with the CLI
    • Interacting with the API
    • Advanced Dataset Usage
    • Advanced Token Usage
  • Using the CLI
    • Setting up Tokens
    • Downloading Datasets
    • Downloading Compendia
    • Getting Information About pyrefinebio Classes and Functions
  • Classes
    • Compendium
    • Computational Result
    • Computed File
    • Dataset
    • Experiment
    • Institution
    • Organism
    • Original File
    • Platform
    • Downloader Job
    • Processor Job
    • Survey Job
    • Processor
    • QN Target
    • Sample
    • Token
    • Transcriptome Index
  • More Stuff
    • High Level Functions
    • Paginated List
    • Config

Indices and tables¶

  • Index

  • Module Index

  • Search Page

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