Data Lab training materials are available on Github, in either this repository or our shared training-modules repository.
PDF versions of the slides we present in this workshop can be found in the slides directory of the
2023-march-training repository, and are also linked to directly from the schedule.
All materials for this workshop can be found in the
training-modules repository within the
This folder includes both instruction notebooks we will walk through during the workshop and exercise notebooks to be used for practice (denoted by the
In this folder, you will notice that there may be two or three versions of some notebook files.
For example, there may be a
02-celltype_assignment.Rmd, and a
- The version with
-live.Rmdat the end is an incomplete version of the notebook, missing some code that will be filled in during the workshop.
.Rmdfile (with no
-live) is a fully completed version of the notebook, useful for reference in case you might have missed any steps during the workshop.
.nb.htmlversion of the file is a rendered web page of the notebook. This file can be downloaded or viewed via the links in the README file that you will see at the bottom of the file listing for each module.
This workshop builds on material found in the
scRNA-seq folder, which may be a helpful reference.
Notebooks and data files required for participation in the workshop will be preloaded for each user on the RStudio server.